Cinnamon Roll Squash Muffins

Do you recall the heavenly aroma of Cinnabon that lingers throughout the shopping mall? I rarely go to the mall because it’s kinda dreadful and claustrophobic for me, but the smell of Cinnabon is not forgotten. Honestly, it smelled like Cinnabon in my house yesterday  when I made these muffins. Luckily, I made and consumed something a million times better than one of those puppies sold in the mall. Yes, it is still a treat (a fall-inspired one in this case), but it’s better than the alternative and homemade too! To be honest, I’ve never actually had anything from Cinnabon in my life — well, maybe a cookie (a very long time ago), but never any cinnamon rolls.

The cinnamon roll topping brings these muffins to life. I’m sure they’d taste wonderful on their own, but cinnamon topping and pecans? Yes, please! Not to toot my own horn here, but these muffins are straight-up wonderful (okay, maybe I’m tooting my own horn a little). The addition of the butternut squash puree makes them incredibly moist. The raw batter tastes good too! I love to clean off the spatula, just like I did when I was a kid.

Cinnamon roll topping:

  • 2 Tbsp melted butter, ghee or coconut oil (I used coconut oil)
  • 2 Tbsp raw honey
  • 1 Tbsp cinnamon


  1. Combine all ingredients together in a small bowl.
  2. Set aside.

Muffin ingredients:

  • 1/2 cup butternut squash puree (fresh or canned – I used this brand)
  • 1/2 cup coconut flour
  • 3 eggs, preferably pasture-raised
  • 1/2 tsp baking soda
  • 1/4 tsp sea salt
  • 1/2 cup melted grass-fed butter, ghee or coconut oil
  • 1 Tbsp pure vanilla extract
  • 1/4 cup raw honey
  • 1/4 – 1/3 cup raw pecans for topping, optional


  1. Combine all ingredients together — except pecans–in the food processor and process until a smooth, fluffy batter forms. Alternatively, you can mix all the dry ingredients together, whisk the wet ingredients together in a separate bowl, and then whisk the wet ingredients into the dry.
  2. Grease muffin cups or line with parchment paper liners. Fill each with approximately 1/4 cup of batter.
  3. Spoon cinnamon mixture over each muffin and top with pecans, if using.
  4. Bake at 350 degrees F for 20-25 minutes or until a toothpick inserted in the center of the muffins comes out clean.

Yields: 9 muffins 

They taste like a bit like pecan pie.

Perfectly moist.

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About paleoinpdx

Born and raised in Alpena, Michigan, I moved to Portland (PDX) in 2008 after graduating from Michigan State University. I currently work as a personal trainer and instructor, and reside with my husband, Jesse and our cats, Dutch and Frankie in inner NE Portland. I am a health and wellness enthusiast that enjoys eating, cooking, moving and living well.

58 responses to “Cinnamon Roll Squash Muffins”

  1. Cinnamoneats says :

    Ummm getting a notification of this post in my email this morning was not the best thing…. now all I can think about are these muffins! I’ve never had cinnabon before but anything with cinnamon and I’m there ;)

    Few questions, do you think you could sub pumpkin puree for the butternut squash puree and also what about using almond flour in place of coconut flour? Only because I have these on hand now so I was just wondering….

  2. Lemons 'n Lyme says :

    Ahhh, can’t wait to make these- just what I’ve been craving :)

    • paleoinpdx says :

      Lemons ‘n Lyme, these are unbelievable! I can’t wait for you to try them. They literally knocked my socks off!

      • Lemons 'n Lyme says :

        Just made these! Very delicioussss, once I tasted the batter I didn’t think they were going to make them into the oven. One thing… my batter was really dry so when I cooked them the center didn’t get completely cooked (that didn’t stop the devouring though :) ). Didn’t know if your was that way or not?

      • paleoinpdx says :

        Huh, that’s strange. No, I didn’t have that problem. Mine were super moist and cooked all the way through and my batter was moist and fluffy. I’m not sure what happened with your batter, but I’m glad they still tasted good! If you make them again and the batter turns out dry, you can maybe try adding a little extra squash puree or a touch of water for moistness.

      • Lemons 'n Lyme says :

        Yeah, I was thinking about doing that (figured I should) but I didn’t want to alter the recipe any since yours came out so perfectly. Well, I’m definitely making these again so I’ll see what happens!

  3. paleoinpdx says :

    Oh wow, I forgot to put that in there! 350 degrees F. I will correct that on the post. My bad!

  4. Cinnamoneats says :

    For anyone who is thinking about making these muffins STOP thinking and just do it! These are some of the best tasting muffins I’ve ever eaten…. next time I’m making double the batch! Thanks Alisa…. now I’m sitting here having my afternoon coffee with a delicious muffin ;)

  5. Megan says :

    I’m not a baker by any means but your blog is making me want to cave and get all these paleo friendly flours!! the only thing that is stopping me is the price tag : ) IDEA – how about you male me some treatS?!? its halloween you know…

    • Megan says :

      and by male I mean mail : P

      • paleoinpdx says :

        Haha, we might be able to work out a deal, Megan ;) You know you can make your own coconut or almond flour at home, right? It’s really easy. The great thing about coconut flour is that a little goes a long way (b/c it’s dense), so it lasts a long time (at least it does for me).

  6. Traci says :

    You are right, even the raw batter tastes fantastic. I liked the bowl clean!

  7. Cinnamoneats says :

    Alisa these muffins are even better cold out of the fridge the next day ;)

  8. Erin Hightower says :

    I’ve made these twice in 24 hours
    (not what you think I have a potluck tomorrow)
    I’m allergic to coconut and had to use almond flour. If some reason you use almond flour double the amount of flour use… they were runny and not thick like your picture until I added more.

    otherwise… fantastic. My none paleo husband LOVED these

    • paleoinpdx says :

      Yes, coconut and almond flour are very different. Coconut flour is extremely dense, so you always use less. With almond flour, you’d need at least 1 cup, if not a bit more for this recipe. I’m glad you figured it out though and that they tasted delicious with almond flour! Awesome that you’ve already made them twice too! Thanks for sharing your modifications!

  9. myfoodreligion says :

    They look like heaven in a muffin.

  10. Jill says :

    These look SO good. I don’t have honey though…hmm…I eat so much sugar in fruit (I’m not paleo by the way…but ought to be), but I always thought honey = sugar added = unnecessary. Maybe I’m limiting myself.

    I so love your recipes but am so limited because I live in a place where nothing is antibiotic free or grass fed. It’s all just the regular ole stuff. Boo :(

    • paleoinpdx says :

      Honey is the only sweetener I use (and can use). I always try and opt for very small amounts, even if something calls for more and especially if there’s fruit in it. I’m so glad you like my recipes, but sorry to hear you don’t have access to much. That’s how it is when I visit my family back in Michigan (I’m from a really small town). Where are you from, Jill? I know it’s not the most convenient thing, but there are lots of great resources for getting things (i.e. grass-fed meats) online. It can be pricey, but it’s nice if you go in on an order with someone.

      • Jill says :

        I live in rural Canada. Not much here. I’ve heard of online stuff, but that would break my bank :) So expensive to eat well…I know people says its not, but it really is.
        Like low-carb folks say its not expensive, but their buying the “crap”” meats, etc…in order to buy stuff without all the junk in it, its expensive. Even eggs…for me to buy organic eggs it would be 6.99, the “antibiotic free” ones are 4.49 and the regular ole ones range from 2-3 bucks…I go with the middle one, but thats sstill STEEP…jeesh.

      • paleoinpdx says :

        I see. Yes, rural areas make it very challenging, but you gotta do the best that you can with what you’ve got, without going broke! I agree that it is more expensive, but my partner and I prioritize and make room for it in our budget, though it’s not always easy. We watch for sales, especially on grass-fed meats and do the best we can. The pastured eggs we buy are a bit spendy too ($5.99/dozen), but they taste and look so much better than just the free range, certified humane eggs.

  11. elissakerpen says :

    Hi Alisa GREAT post – I can’t wait to try it out. Have you seen my new Sweet Paleo Frozen Breakfast
    can’t wait to see more of these!


    • paleoinpdx says :

      Hey Elissa, thanks! The muffins are super good, and I hope you enjoy them as much as I did. Thanks for sharing the link to your breakfast post! It looks delicious — almost like dessert!

  12. Nikki says :

    Hi paleoinpdx, Thanks for following my blog! This recipe looks so good and I love the consistency of the cake, it looks a little spongey and not crumbly (like how some coconut-based recipes can turn out). I will definitely try this one out! Hope you enjoyed my new soup recipe today and let me know if you have any foods you would like to learn more about scientifically. :)

    • paleoinpdx says :

      Likewise! Nope, these aren’t crumbly at all, but I totally know what you’re talking about. I’ve definitely had good and bad experiences with coconut flour. This was a good one ;)

  13. Alisa says :

    These were also a hit! Super tasty. I ended up doing half pure maple syrup and half honey for the “sweetner.”

    Even hubby said the flavors were great. Though he put jam on top and extra butter and maple syrup BUT he did eat them =)

  14. Stephanie says :

    Hi. Found this recipe via a friend. I don’t follow a paleo diet and was wondering if I could sub white whole wheat for the coconut flour? I saw you said coconut flour was dense, but ive never worked with it so not sure how dense it is compared to wheat flours. Can’t use the other flours bc of allergies in the family. Thanks. They look delish!

    • paleoinpdx says :

      You can, but it’s not an equal substitution. You’ll end up using more wheat flour because it’s much less dense than the coconut (coconut is VERY dense). I don’t know exactly how much to tell you to use, but it’ll probably be at least double that of the coconut. I take it you have coconut/tree nut allergies in your family?

  15. Stephanie says :

    Thanks for the quick response! I’ll experiment with the amount-thanks. Yup…I’m allergy free but not some of my boys.

  16. Stevie says :

    Just made these with a lot of improv and they came out amazing….so I would like to declare them foolproof! I food-processed coconut meat flakes to make my own flour but it was courser that what you probably had so I increased the amount until I liked the consistency of the batter……I ran out of honey during (I was also baking some honey-chipotle chicken for the week), so i made the topping with agave…..and I used canned pumpkin since I always have some in the house……made 11 muffins, and they are just right!

    • paleoinpdx says :

      I didn’t even know my muffins were foolproof, but I’m happy to hear it ;) I’m glad everything worked out for you and it sounds like you had fun making them! It makes me happy when people try and like my recipes, so thank you!

  17. rena says :

    Chaperoned a field trip this weekend and needed something to snack on during the ride, made these and everyone LOVED them!!

  18. Paleo rules says :

    I REALLY I extremely love Paleo… I have been on it for 4 months & have noticed such great positive
    changes…. I strongly recommend this to ANYBODY! I started the diet off by watching this youtube vid for great recipes!
    !! here

  19. Susan says :

    What brand of coconut flour are you using? Have you used any flours other than coconut or almond?
    Thanks in advance

    • paleoinpdx says :

      Hi Susan,

      I use the Coconut Secret brand of coconut flour. No, I only use coconut or almond flour when baking, but have also used almond butter or sunflower seed butter (which essentially acts as flour). As you know, I don’t eat grains, so never use grain/gluten flours and things like tapioca flour/starch and arrowroot flour don’t work for me even though they are paleo-friendly. It’s too much starch for my system and I need to be careful with stuff like that.

  20. Ellie says :

    Hi, I just make this muffin and turns out soos good. Actually i have doubled everything but I mixed coconut flour and almond flour for double recipe. I love it. thanks for sharing :) Ellie

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